pyhelios.PlantHydraulics Namespace Reference

Classes
class	HydraulicCapacitance
	Hydraulic capacitance of a leaf, stem or root, from pressure-volume curve parameters. More...
class	HydraulicConductance
	Hydraulic conductance of a leaf, stem or root as a function of water potential. More...
class	PlantHydraulicsModel
	High-level interface for plant hydraulics modeling. More...
class	PlantHydraulicsModelCoefficients
	Hydraulic conductance and capacitance parameters of the leaf, stem and root compartments. More...
class	PlantHydraulicsModelError
	Exception raised for PlantHydraulics-specific errors. More...

Functions
str	_validate_species (species, str method_name)
float	_validate_float (value, str name, str method_name)
int	_validate_int (value, str name, str method_name, int minimum)
bool	_validate_bool (value, str name, str method_name)
List[int]	_validate_uuids (UUIDs, str method_name)
HydraulicConductance	_make_conductance (method_name, saturated_conductance, potential_at_half_saturated, sensitivity, temperature_dependence)
HydraulicCapacitance	_make_capacitance (method_name, first, relative_water_content_at_turgor_loss, cell_wall_elasticity_exponent, saturated_specific_water_content=None)
PlantHydraulicsModel	create_plant_hydraulics_model (Context context)
	Create PlantHydraulicsModel instance with context.

Variables
	logger = logging.getLogger(__name__)
tuple	AVAILABLE_SPECIES

Function Documentation

_make_capacitance()

HydraulicCapacitance pyhelios.PlantHydraulics._make_capacitance ( method_name, first, relative_water_content_at_turgor_loss, cell_wall_elasticity_exponent, saturated_specific_water_content = None )

protected

Definition at line 223 of file PlantHydraulics.py.

_make_conductance()

HydraulicConductance pyhelios.PlantHydraulics._make_conductance ( method_name, saturated_conductance, potential_at_half_saturated, sensitivity, temperature_dependence )

protected

Definition at line 210 of file PlantHydraulics.py.

_validate_bool()

bool pyhelios.PlantHydraulics._validate_bool ( value, str name, str method_name )

protected

Definition at line 65 of file PlantHydraulics.py.

_validate_float()

float pyhelios.PlantHydraulics._validate_float ( value, str name, str method_name )

protected

Definition at line 49 of file PlantHydraulics.py.

_validate_int()

int pyhelios.PlantHydraulics._validate_int ( value, str name, str method_name, int minimum )

protected

Definition at line 57 of file PlantHydraulics.py.

_validate_species()

str pyhelios.PlantHydraulics._validate_species ( species, str method_name )

protected

Definition at line 38 of file PlantHydraulics.py.

_validate_uuids()

List[int] pyhelios.PlantHydraulics._validate_uuids ( UUIDs, str method_name )

protected

Definition at line 71 of file PlantHydraulics.py.

create_plant_hydraulics_model()

PlantHydraulicsModel pyhelios.PlantHydraulics.create_plant_hydraulics_model

(

Context

context

)

Create PlantHydraulicsModel instance with context.

Parameters

context

Helios Context

Returns

PlantHydraulicsModel instance

Definition at line 1247 of file PlantHydraulics.py.

Variable Documentation

AVAILABLE_SPECIES

tuple pyhelios.PlantHydraulics.AVAILABLE_SPECIES

Initial value:

=  (
    "Walnut", "walnut",
    "PistachioFemale", "pistachiofemale", "pistachio_female", "Pistachio_Female", "Pistachio_female",
    "pistachio", "Pistachio",
    "Elderberry", "elderberry", "blue_elderberry",
    "Western_Redbud", "western_redbud", "Redbud", "redbud",
)

Definition at line 29 of file PlantHydraulics.py.

logger

pyhelios.PlantHydraulics.logger = logging.getLogger(__name__)

Definition at line 19 of file PlantHydraulics.py.